Further process the seurat object from simulated transciptome output and make UMAP ready for plotting.

Source: R/Echidna_other_functions.R

Further process the seurat object from simulated transciptome output and make UMAP ready for plotting.

get.umap(gex, d, reso)

Arguments

gex

output from get.elbow function.

d

dims argurment of in Seurat::FindNeighbors() and Seurat::RunUMAP

reso

resolution argument in Seurat::FindClusters()

Value

Further processed seurat object from simulated transciptome output with UMAP ready for plotting.