Get clone network igraphs colored by seurat cluster id.

Get clone network igraphs colored by seurat cluster id.

cluster.id.igraph(meta.data, history, igraph.index, empty.node)

Arguments

meta.data

the meta.data dataframe from the Seurat object of the simulation. The object should be pre-processed and has cluster ids in the meta.data.

history

The dataframe 'history' from the simulation output.

igraph.index

The list 'igraph.index' from the simulation output.

empty.node

If TRUE, there will be empty node in igraph. if FALSE, the empty node will be deleted.

Value

a list of clone network igraphs colored by seurat cluster id