Plot clonal frequency barplot of the outout simulated data

Plot the top abundant clonal frequencies in a barplot with ggplot2

clonofreq(clonotypes, top.n, y.limit)

Arguments

clonotypes: The clonotypes dataframe, which is the second element in the simulation output list.
top.n: The top n abundant clones to be shown in the plot. If missing, all clones will be shown.
y.limit: The upper limit for y axis in the plot.

top abundant clonal frequencies in a barplot with ggplot2